eurobonet
 
 
This is the description of the data

# Level Name Description Comment Mandatory Multiple Values
1patient patientcode The unique local patient code to which a institute code will be added to the front. Privacy issues need to be solved locally before uploading the data. No direct identifiable data is allowed in the database.
2patient stage stage and TNM (eg. T1a1N1M1 250 characters free text
3patient Grade Grade of the tumor Free text
4patient age age of the patient at the time of diagnosis. only blank or an integer value is allowed here
5patient Sex the gender of the patient only blank or M or F is allowed here
6patient trial is this patient involved in a clinical trial? only blankor 1 (for yes) or 0 (for no) are allowed
7patient trial reference trial reference number in case the patient is involved in a clinical trial Free Text
8patient history patients medical history, treatment, complications, toxicity, concominant disease, secondary tumours, laboratory data, ... Free text
9patient keywords a comma-delimited list of known facts applicable to the patient Self definable dropdown
10patient patient comments comments on the patient Free text
11tissue tissuecode your unique local tissue code (without an institute prefix)Privacy issues need to be solved locally before uploading the data. No direct identifieble data is allowed in the database. 250 characters (institute code is added upon submission in front)
12tissue, blood topography site of the tumor/topography only the codes used in the ICDO3 histology list are allowed. This list can be found by clicking the ICDO3 histology button in the EuroBoNet
13tissue blood diag1 Histpatohological Diagnosis 1 only the codes used in the ICDO3 histology list are allowed. This list can be found by clicking the ICDO3 histology button in the EuroBoNet
14tissue blood diag2 Histpatohological Diagnosis 2 only the codes used in the ICDO3 histology list are allowed. This list can be found by clicking the ICDO3 histology button in the EuroBoNet
15tissue blood diag3 Histpatohological Diagnosis 3 only the codes used in the ICDO3 histology list are allowed. This list can be found by clicking the ICDO3 histology button in the EuroBoNet
16tissue fixation method of fixation used only frozen for Frozen or paraffin for Paraffin embedded formalin fixed
17tissue condition condition of the tissue only blank or tumor or non-tumor or interface are allowed here
18Tissue, Blood Storageconditions Storage conditions of the sample are given. These can be added or altered by the administrator Text
19Tissue, Blood, Cell lines, Xenografts, TMA, DNA, RNA, protein Availability Default is YES and describes whether the sample is readilly available for use YES / NO
20Tissue/blood/xeno/cell lines DNA/RNA/Protein Contact E-mail address or name to contact for request 250 characters Free text
21Tissue/blood/xeno/cell lines DNA/RNA/Protein Comment Abny comment on the sample derivative can be given Free text
22Antibody Antibody name Name given to recognize the antobody text
23Antibody Antigen Protein site to which the antibody reacts text
24Antibody Company Company that markets the antibody text
25Antibody Clone The clone identifier for the antibody text
26Antibody Bone tumour tissue tested Describe the bone tumor tissue that has been tested to this antibody text
27Antibody Application Describe how this antobody is used. Concentration and protocol
28Antibody Positive/negative control tissue Describe the positive and negatives controles that are needed with this antibody text
29Cell line / Xenograft Cell-line code The unique cell line code. Privacy issues need to be dealt with locally. No directly identifieble data is allowed on this site.
30Cell-line/ Xenograft Cell-line type Choose the cell line type: Cell line Xengraft Cell line from xenograft Cell line from tumor text
31Cell-line / Xenograft Passage of the available cell-line numbers
32tissue decalcified only blank or 1 (for yes) or 0 (for no) are allowed 1 (yes) or 0 (No)
33tissue Project s 0 (for EuroBoNet) or 1 (for EuroBoNet+Tubafrost) 2 (for Tubafrost)
34tissue tissue comments comments on the tissue Free text
35Blood Sample code Your unique local tissue code (without institute prefix) 250 characters (institute code is added upon submission in front)
36TMA Name Name of the Tissue Micro Array free text
37TMA Disease or thema Describes the aim and the content of the TMA Free text
38TMA Organ(s) Organ where cores were taken from
39TMA Nr donor The amount of donors on the recipient block numbers
40TMA Nr cores The number of cores in the recipient block numbers
41TMA Core Diameter Core diameter, usually 0,6; 1,0; 1,5 and 2,0 mm Numbers
42TMA Disease Sub1(to 3) catagory What subcatagories of diseases to the main thema or disease a can be distinguished on the TMA Free text
43TMA Infromation Information on the TMA that can help any future research with the TMA Free text
44TMA Used for Described the experiments the TMA has been used for Free text
45Blood Collectionmethod Blood can be isolated under many different conditions. The collectionmethod describes the method used and can be added or altered by the administrator text
46Tissue Time between biopsy and freezing (hh:mm) Hours : minutes
47Tissue/blood/xeno/cell lines DNA/RNA/Protein Availability Type Choose DNA/RNA/Protein DNA/RNA/Protein
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